26,455 research outputs found

    On periodic homeomorphisms of spheres

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    The purpose of this paper is to study how small orbits of periodic homemorphisms of spheres can be.Comment: Published by Algebraic and Geometric Topology at http://www.maths.warwick.ac.uk/agt/AGTVol1/agt-1-22.abs.htm

    Investigation of a Protein Complex Network

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    The budding yeast {\it Saccharomyces cerevisiae} is the first eukaryote whose genome has been completely sequenced. It is also the first eukaryotic cell whose proteome (the set of all proteins) and interactome (the network of all mutual interactions between proteins) has been analyzed. In this paper we study the structure of the yeast protein complex network in which weighted edges between complexes represent the number of shared proteins. It is found that the network of protein complexes is a small world network with scale free behavior for many of its distributions. However we find that there are no strong correlations between the weights and degrees of neighboring complexes. To reveal non-random features of the network we also compare it with a null model in which the complexes randomly select their proteins. Finally we propose a simple evolutionary model based on duplication and divergence of proteins.Comment: 19 pages, 9 figures, 1 table, to appear in Euro. Phys. J.

    Speciational view of macroevolution: are micro and macroevolution decoupled?

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    We introduce a simple computational model that, with a microscopic dynamics driven by natural selection and mutation alone, allows the description of true speciation events. A statistical analysis of the so generated evolutionary tree captures realistic features showing power laws for frequency distributions in time and size. Albeit these successful predictions, the difficulty in obtaining punctuated dynamics with mass extinctions suggests the necessity of decoupling micro and macro-evolutionary mechanisms in agreement with some ideas of Gould's and Eldredge's theory of punctuated equilibrium.Comment: Europhys. Lett. 75:342--34

    Quenching of the beam-plasma instability by 3-D spectra of large scale density fluctuations

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    A model is presented to explain the highly variable yet low level of Langmuir waves measured in situ by spacecraft when electron beams associated with Type III solar bursts are passing by; the low level of excited waves allows the propagation of such streams from the Sun to well past 1 AU without catastrophic energy losses. The model is based, first, on the existence of large scale density fluctuations that are able to efficiently diffuse small k beam unstable Langmuir waves in phase space, and, second, on the presence of a significantly isotropic nonthermal tail in the distribution function of the background electron population, which is capable of stabilizing larger k modes. The strength of the model lies in its ability to predict various levels of Langmuir waves depending on the parameters. This feature is consistent with the high variability actually observed in the measurements

    A nonstationary generalization of the Kerr congruence

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    Making use of the Kerr theorem for shear-free null congruences and of Newman's representation for a virtual charge ``moving'' in complex space-time, we obtain an axisymmetric time-dependent generalization of the Kerr congruence, with a singular ring uniformly contracting to a point and expanding then to infinity. Electromagnetic and complex eikonal field distributions are naturally associated with the obtained congruence, with electric charge being necesssarily unit (``elementary''). We conjecture that the corresponding solution to the Einstein-Maxwell equations could describe the process of continious transition of the naked ringlike singularitiy into a rotating black hole and vice versa, under a particular current radius of the singular ring.Comment: 6 pages, twocolum

    The worldwide air transportation network: Anomalous centrality, community structure, and cities' global roles

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    We analyze the global structure of the world-wide air transportation network, a critical infrastructure with an enormous impact on local, national, and international economies. We find that the world-wide air transportation network is a scale-free small-world network. In contrast to the prediction of scale-free network models, however, we find that the most connected cities are not necessarily the most central, resulting in anomalous values of the centrality. We demonstrate that these anomalies arise because of the multi-community structure of the network. We identify the communities in the air transportation network and show that the community structure cannot be explained solely based on geographical constraints, and that geo-political considerations have to be taken into account. We identify each city's global role based on its pattern of inter- and intra-community connections, which enables us to obtain scale-specific representations of the network.Comment: Revised versio

    Multi-beam Energy Moments of Multibeam Particle Velocity Distributions

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    High resolution electron and ion velocity distributions, f(v), which consist of N effectively disjoint beams, have been measured by NASA's Magnetospheric Multi-Scale Mission (MMS) observatories and in reconnection simulations. Commonly used standard velocity moments generally assume a single mean-flow-velocity for the entire distribution, which can lead to counterintuitive results for a multibeam f(v). An example is the (false) standard thermal energy moment of a pair of equal and opposite cold particle beams, which is nonzero even though each beam has zero thermal energy. By contrast, a multibeam moment of two or more beams has no false thermal energy. A multibeam moment is obtained by taking a standard moment of each beam and then summing over beams. In this paper we will generalize these notions, explore their consequences and apply them to an f(v) which is sum of tri-Maxwellians. Both standard and multibeam energy moments have coherent and incoherent forms. Examples of incoherent moments are the thermal energy density, the pressure and the thermal energy flux (enthalpy flux plus heat flux). Corresponding coherent moments are the bulk kinetic energy density, the RAM pressure and the bulk kinetic energy flux. The false part of an incoherent moment is defined as the difference between the standard incoherent moment and the corresponding multibeam moment. The sum of a pair of corresponding coherent and incoherent moments will be called the undecomposed moment. Undecomposed moments are independent of whether the sum is standard or multibeam and therefore have advantages when studying moments of measured f(v).Comment: 27 single-spaced pages. Three Figure
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